Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809345.1_cds_XP_016495700.1_9993
CDS Infomation

[gene=LOC107814759] [db_xref=GeneID:107814759] [protein=type I inositol polyphosphate 5-phosphatase 5-like isoform X2] [protein_id=XP_016495700.1] [location=complement(join(24135..24195,24798..24946,25273..25381,26448..26641,27004..27520,27634..27738,27821..27908,28837..28911,29032..29119,29233..29388))] [gbkey=CDS]
Sequence

ATGTCGTCGCCAACAAGGCGTTGTAAATCTGATGATAACATCCACATGATTAAGGCAGCC
GCCATCAACACCACCCCCGGCGGCGGCGCTAGAACTTCCCCTAGCAGCTCTACAGCCACC
ACCCCTGACAATTCTGTAAAGGGTGAAAAAAAGAAGTGTATCATCCCAAAGCTCTTTAGT
TCCAAAAGAAGCAGTATAGGAGGCTCTGAGGAGGACCTAACACAATCAGATAACAATGAT
CAAGAAGTGGATTGGAGGATTACATCAAGGAGAAAAGCTTTTCTTGAAACGTCTTCTACA
GTGAAGAGAAGTTTCTCAGAAAGGCATAATAGTGCACGGATTGAAGGCCTAAATCTTTCG
ACTTTTGATCATTCCACGGCACCTGCTACTATGATTAAAAGTATTAGGGTTTTTGCCGGG
ACATGGAATGTAGGAGGAAAAACTCCTAATCATGGACTTAATCTTGAAGATTTCTTGCAA
GTGGAAGGTTCTGCAGACATATATGTTTTGGGGTTTCAAGAAATTGTTCCCTTAAATGCA
GGAAATATATTAGTGAGTGAAGATAGTGAGCCAGCAGCAAGATGGTTAGCACTCATAAGC
CATGCATTAAACAAATCATATCATGAATCAGTCCAGTCTTGTGATTCAAGCTACCATAAT
TCAAAACATTCAAAATCCAACTCTTTTCATAAGCATTCTCTTAAAAGCCTTAGCAAGAGT
TTGAGAACTAATAGTACCCTTCTCAAGACTTGTAATTGCCCTTTAGAATCAACAACAACA
AGGCGTCAACGAAAGCTCAGTGATCCTTCTTGTTCTCCCTTGAATCATCATCGCGATTCC
AGTGAAGAAGATTTACAATCAATTGCAGAATTTCCTTCTTCTAATGGTTTGAGTTATAAT
CTCATAGCAAGTAAGCAAATGGTGGGGATTTTCCTTTCAGTTTGGGCACGAAAAGAGTTA
GCGCATCATATTGGCCATCTCAGAATATCTTCTCTTGGAAGAGGTATCATGGGTTGTCTA
GGAAACAAGGGGTGTATAGCAATAAGCATGTCACTGTATCGAACGAGCTTTTGCTTTGTG
TGCAGTCACTTGGCTTCTGGGGAAAAAGAAGGAGATGAGCTGAGAAGAAATGCTGATGTA
GCTGAGATTCTCAAAAGCATACAATTTTCCAGAATTTGTACCACTTCAGACAGCCGAATG
GCAGAAAAAATTAGTGATCATGACCGTGTGATATGGCTTGGAGACTTGAACTACCGAGTG
TCTTTGAGCTATGAGGAAACTAGGCTGTTGTTAGAGGATAATGACTGGGACTCTCTTTTG
GAAAAGGATCAGCTGAATGTGGAGAGAGAAGCAGGAAGAGTATTCAGTGGGTGGAATGAA
GGCAAGATCTTCTTTGCCCCAACTTATAAGTACTCTCATAATTCAGATTCCTATGCCGGA
GAGACTACCAAATCAAAGAAGAAACGACGAACCCCTGCATGTATTTGCCGTGGATGTGGA
GGCGGAGGCAGAGGCAGAGGCCAACAACAACTCAAAGTTTAG

Peptide Sequence

PEP ID

XP_016495700.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 5-like isoform X2 [Nicotiana tabacum]
Sequence

MSSPTRRCKSDDNIHMIKAAAINTTPGGGARTSPSSSTATTPDNSVKGEKKKCIIPKLFS
SKRSSIGGSEEDLTQSDNNDQEVDWRITSRRKAFLETSSTVKRSFSERHNSARIEGLNLS
TFDHSTAPATMIKSIRVFAGTWNVGGKTPNHGLNLEDFLQVEGSADIYVLGFQEIVPLNA
GNILVSEDSEPAARWLALISHALNKSYHESVQSCDSSYHNSKHSKSNSFHKHSLKSLSKS
LRTNSTLLKTCNCPLESTTTRRQRKLSDPSCSPLNHHRDSSEEDLQSIAEFPSSNGLSYN
LIASKQMVGIFLSVWARKELAHHIGHLRISSLGRGIMGCLGNKGCIAISMSLYRTSFCFV
CSHLASGEKEGDELRRNADVAEILKSIQFSRICTTSDSRMAEKISDHDRVIWLGDLNYRV
SLSYEETRLLLEDNDWDSLLEKDQLNVEREAGRVFSGWNEGKIFFAPTYKYSHNSDSYAG
ETTKSKKKRRTPACICRGCGGGGRGRGQQQLKV

Transcript Sequence

Gene sequence data has not been registered.